BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B08SP1|AL428008
(1081 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig770 915 0.0
3x_Contig1061 635 0.0
>3x_Contig770
Length = 2203
Score = 915 bits (461), Expect = 0.0
Identities = 471/473 (99%), Gaps = 1/473 (0%)
Strand = Plus / Plus
Query: 608 ggcttttaactcgtctttaccctcatcgctcgagttgacgtttgaattcgatgttttaga 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggcttttaactcgtctttaccctcatcgctcgagttgacgtttgaattcgatgttttaga 63
Query: 668 gaacatcaacaaagtggaggcatcgtctattaacgactggtcctgagcatgttctatagt 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gaacatcaacaaagtggaggcatcgtctattaacgactggtcctgagcatgttctatagt 123
Query: 728 accatccgtcatcgtttactgtatatttccttcttgtattgcggtatttgatttgaatat 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 accatccgtcatcgtttactgtatatttccttcttgtattgcggtatttgatttgaatat 183
Query: 788 ttgaaattgaatgaaaagtcggtaccttaatattaataaagatgtcctaacttgcccagc 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttgaaattgaatgaaaagtcggtaccttaatattaataaagatgtcctaacttgcccagc 243
Query: 848 ttgatatacttatatacccttctttatcttaaaagggatccctgttttcagggcctagta 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttgatatacttatatacccttctttatcttaaaagggatccctgttttcagggcctagta 303
Query: 908 tgcttgttgtccgagctatcgaagtatagaaagcacagctaaaacagtctatacgttctg 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgcttgttgtccgagctatcgaagtatagaaagcacagctaaaacagtctatacgttctg 363
Query: 968 aatcaaacccaacaggaaaaaattaaacggccctttctgatcctcgtacagctgttctat 1027
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aatcaaacccaacagg-aaaaattaaacggccctttctgatcctcgtacagctgttctat 422
Query: 1028 caagtttgccaacggttacttcgtgaaagagatatgtgcgagttccttattga 1080
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 423 caagtttgccaacggttacttcgtgaaagagatatgtgcgagtaccttattga 475
>3x_Contig1061
Length = 4663
Score = 635 bits (320), Expect = 0.0
Identities = 339/343 (98%), Gaps = 3/343 (0%)
Strand = Plus / Plus
Query: 5 acaatggtcgcattgtatagtaaatccatcatcatcttcatagccacagatgcacgttat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4323 acaatggtcgcattgtatagtaaatccatcatcatcttcatagccacagatgcacgttat 4382
Query: 65 tataccagcatctggatcaacaacataagattcgggaaccgaagaaaacctatccgtttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4383 tataccagcatctggatcaacaacataagattcgggaaccgaagaaaacctatccgtttc 4442
Query: 125 agatttttcaagtttttgttcctctacagcttctttgaaactatcttcttgttccaccac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4443 agatttttcaagtttttgttcctctacagcttctttgaaactatcttcttgttccaccac 4502
Query: 185 tttatcttcgctctttgcttgctttgaaggagatttttcctcggcacctgatctaggcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4503 tttatcttcgctctttgcttgctttgaaggagatttttcctcggcacctgatctaggcat 4562
Query: 245 tggcacgctgt-tgttcgcagcaggttttctatcgttttctgcttttcgtttaagaggta 303
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4563 tggcacgctgtgtgttcgcagcaggttttctatcgttttctgcttttcgtttaagaggta 4622
Query: 304 gtggcatcgtagctgcttgtgctaacgcagcagccgcaaccat 346
||||||||||||||||| || |||||||||||||||||||||
Sbjct: 4623 gtggcatcgtagctgct--tggtaacgcagcagccgcaaccat 4663
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8923
Number of Sequences: 1807
Number of extensions: 8923
Number of successful extensions: 122
Number of sequences better than 1.0e-20: 2
length of query: 1081
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1065
effective length of database: 10,329,639
effective search space: 11001065535
effective search space used: 11001065535
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)